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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910843.1_cds_XP_016460882.1_54265
CDS Infomation

[gene=LOC107784290] [db_xref=GeneID:107784290] [protein=zingipain-2-like] [protein_id=XP_016460882.1] [location=join(39715..40162,40760..41200,41276..41403)] [gbkey=CDS]
Sequence

ATGGCTATGAAAATCAATTTGATCAGTGTTGTAATATTGTTCTTTGTAGTTGGCATGTAC
AAGTCTCATGCAACGGCTCGCAACCTGCAGCCAGAATTATCTGTGTCAGAGAGACACGAG
CTGTGGATGGCACGTCATGGACGAGTTTACAAGGATGAAGCAGAAAAAGGAAAACGACTC
ATGATATTTAAAGAAAACATGCAATTCATTGAGTCAATCAATAGGGCAGGGAATCTGTCT
TATAAGTTGGGCATCAATGAATTTGCCGATATTACTTCAGATGAGTTTTTTGCCAGGTAC
ACTGGATTAAACATGCCTTCACACCTCCCATCTTCTCCGGTATCGTCGATGGAATTCAAG
ATTAATGATCTAACTGATGACATGCCGTCGAACTTGGATTGGAGAGAGAAAGGAGCTGTC
ACTGAAGTGAAGTACCAAGGTCTTTGTGGATGTTGCTGGGCATTCTCTGCAGTTGGAGCA
CTAGAGGGAGCATACCAAATTGCAACAGGCCAAAAGGTGGAACTTTCTGAGCAAGAACTT
CTCGATTGCACCACCAATAACAATGGCTGCAAAGGAGGATTTATGACCAATGCATTTGAA
TTCATCATTGAAAATGGTGGAATTTCCACTGAATCAGACTACCCTTATGAAACGCAACAA
GACACATGCAGAAGCCAAGAGCTCACACCAGCAGTTAAAATAAGTAGCTATCAAGTTGTG
CCTGAAAGTGAAACAGCATTATTGCAAGCCGTAACTCAACAACCAGTGTCAATTGGAATT
TCTGCTAGCCAAGAGTTCCAATTCTACCAAGGAGGAACTTATCAAGGAAGTTGCGCAGAT
CGAATTAACCATGCTGTTACAGCGATAGGATATGGAACTGATGAACAAGGTCAAAATTAT
TGGTTATTCAAGAATTCATGGGGAACATCTTGGGGTGAGAATGGATTCATGAAAATTATA
AGAGGTACTGGAGGTCATTGTGACATCACCAAGTTGTCTTCTTATCCAGTCATTTAA

Peptide Sequence

PEP ID

XP_016460882.1
PEP Infomation

PREDICTED: zingipain-2-like [Nicotiana tabacum]
Sequence

MAMKINLISVVILFFVVGMYKSHATARNLQPELSVSERHELWMARHGRVYKDEAEKGKRL
MIFKENMQFIESINRAGNLSYKLGINEFADITSDEFFARYTGLNMPSHLPSSPVSSMEFK
INDLTDDMPSNLDWREKGAVTEVKYQGLCGCCWAFSAVGALEGAYQIATGQKVELSEQEL
LDCTTNNNGCKGGFMTNAFEFIIENGGISTESDYPYETQQDTCRSQELTPAVKISSYQVV
PESETALLQAVTQQPVSIGISASQEFQFYQGGTYQGSCADRINHAVTAIGYGTDEQGQNY
WLFKNSWGTSWGENGFMKIIRGTGGHCDITKLSSYPVI

Transcript Sequence

Gene sequence data has not been registered.